Common Technical Document: A Guide to CTD Format and Submission Requirements

Table of Contents

  • The common technical document (CTD) is a standard format used for submitting pharmaceutical applications to regulators in ICH countries.
  • CTD consists of five modules that include administrative details, product quality, nonclinical studies, clinical studies, and region-specific requirements.
  • Electronic CTD (eCTD) has become the preferred submission format in most regulatory regions, replacing paper-based applications.
  • Module 3 (Quality) requires detailed manufacturing information such as batch records, validation data, and facility details.
  • Most pharmaceutical companies need 6-12 months to prepare a complete CTD for a new drug application.

Pharmaceutical companies file thousands of regulatory submissions each year. Each country historically required different formats, different organization, and different documentation standards.

The common technical document solved this problem. Created through the International Council for Harmonisation (ICH), the CTD provides one universal format that regulatory agencies accept across major markets.

This guide explains how the CTD works, what each module contains, and how manufacturers prepare submissions that meet global regulatory standards.

What Is a Common Technical Document?

The common technical document is the internationally agreed format for pharmaceutical regulatory documentation submitted to health authorities. The CTD organizes all information about a drug’s safety, efficacy, and quality into five distinct modules.

The ICH developed this format through collaboration between regulatory authorities and pharmaceutical industry representatives from the U.S., Europe, and Japan. The goal was simple: create one structure that works everywhere.

Before the CTD, companies assembled completely different application packages for different countries. The FDA wanted information in one sequence. The European Medicines Agency (EMA) required a different organization. This created massive duplication of effort.

The CTD doesn’t eliminate all regional differences. Each region still has specific requirements for Module 1. But Modules 2-5 remain identical across all ICH regions, which represent the bulk of the technical content.

CTD ModuleContent FocusRegional VariationTypical Page Count
Module 1Administrative & prescribing infoCompletely regional50-200 pages
Module 2Overviews and summariesIdentical across regions200-400 pages
Module 3Quality (chemistry, manufacturing)Identical across regions500-1,500 pages
Module 4Nonclinical study reportsIdentical across regions1,000-3,000 pages
Module 5Clinical study reportsIdentical across regions2,000-10,000+ pages

Understanding the regulatory strategy for drug development helps companies plan when and how to prepare CTD submissions throughout the development lifecycle.

The Five CTD Modules Explained

Each module serves a specific purpose in the regulatory review process. Reviewers from different disciplines focus on different modules based on their expertise.

Module 1: Administrative Information

This module varies completely by region. In the U.S., Module 1 contains FDA forms, proposed labeling, and administrative documents.

In Europe, it includes application forms and draft product information. In Japan, it contains documents specific to PMDA requirements.

Module 2: Common Technical Document Summaries

Module 2 provides high-level summaries that allow reviewers to quickly understand the key aspects of the application.

Module 2 SectionPurposeTarget Audience
2.3 – Quality Overall SummarySummarizes manufacturing and controlsChemistry reviewers
2.4 – Nonclinical OverviewHigh-level view of animal studiesPharmacology/toxicology reviewers
2.5 – Clinical OverviewKey clinical data and conclusionsMedical reviewers
2.6 – Nonclinical Written SummaryDetailed nonclinical resultsNonclinical specialists
2.7 – Clinical SummaryDetailed clinical trial resultsClinical specialists

These summaries help reviewers quickly identify potential issues before they dive into detailed reports.

Module 3: Quality

Module 3 contains all the chemistry, manufacturing, and controls (CMC) information. This module proves that the manufacturer can produce the drug consistently with acceptable quality standards.

From our experience working with pharmaceutical manufacturers, Module 3 often takes the longest to compile. It requires extensive documentation from multiple departments.

SectionContentKey Documents
3.2.S – Drug SubstanceAPI manufacturing and characterizationSynthesis flowcharts, specifications, stability data
3.2.P – Drug ProductFinal dosage form manufacturingFormulation details, manufacturing process, container closure
3.2.A – AppendicesSupporting analytical dataValidation reports, certificates of analysis
3.2.R – Regional InformationRegion-specific requirementsVaries by submission region

The quality module must demonstrate compliance with current Good Manufacturing Practices (cGMP). Companies need detailed electronic batch record documentation, validation protocols, and analytical method validation data to support Module 3 claims.

Infographic: Global Acceptance of the CTD Format. The Common Technical Document provides a universal format for regulatory submission. A professional in a white coat hands a document.

Module 4: Nonclinical Study Reports

Module 4 contains reports from animal studies that assess safety and pharmacology. These studies evaluate how the drug works in animal models.

The module includes pharmacology studies, pharmacokinetic data, toxicology studies, and carcinogenicity studies when required.

Module 5: Clinical Study Reports

Module 5 contains detailed reports from all clinical trials conducted to support the application. This typically represents the largest portion of the CTD in terms of page count.

The module includes biopharmaceutics studies, efficacy trial results, safety data across all clinical studies, and special population studies. Each clinical study report follows a structured format defined by ICH E3 guidelines.

For products developed under the 505(b)(2) pathway, companies may reference existing clinical data. Understanding 505b2 drugs helps manufacturers determine which studies they need to conduct versus which can rely on published literature.

Understanding ICH M4 Guidelines

The ICH M4 guidelines provide the official specifications for how to organize a drug registration dossier.

GuidelineTitleWhat It Covers
ICH M4(R4)Common Technical Document OrganizationOverall CTD structure and granularity
ICH M4S(R2)SafetyDetailed requirements for nonclinical sections
ICH M4Q(R1)QualityDetailed requirements for quality sections
ICH M4E(R2)EfficacyDetailed requirements for clinical sections

These guidelines specify the exact numbering system, section titles, and granularity level for organizing information. Following M4 precisely ensures regulatory agencies can find information quickly during their review.

CTD vs eCTD: Key Differences

The electronic Common Technical Document (eCTD) represents the next evolution of the CTD format. 

While the underlying content organization remains identical, eCTD adds standardized file formats and electronic submission specifications.

FeaturePaper/PDF CTDElectronic CTD (eCTD)
Submission FormatPaper or simple PDF filesStructured XML with PDF content
HyperlinksManual cross-referencesAutomated navigation between sections
Lifecycle ManagementComplete resubmission of sectionsIncremental updates tracked by sequence
ValidationManual review onlyAutomated validation tools check structure
Agency PreferenceOutdated in most regionsRequired or strongly preferred
File OrganizationFolders with documentsBackbone file with linked content

The CTD vs eCTD difference matters because most regulatory agencies now require or strongly prefer eCTD submissions. The FDA mandated eCTD for most submission types.

eCTD submissions use a “backbone” XML file that defines the structure and points to individual PDF documents for each section. 

Companies submit eCTD updates as numbered sequences. Sequence 0000 represents the initial application. Subsequent sequences contain only changed documents.

How to Prepare a CTD Submission

A successful CTD compilation process requires careful planning and cross-functional coordination. Most pharmaceutical companies need 6-12 months to assemble a complete new drug application.

Companies should define their target product profile early in development, as this guides what data to generate and how to present it in the CTD.

Phase 1: Planning (2-3 months before compilation)

Identify a submission lead who coordinates all contributors. Map out which departments provide which sections. Establish a master timeline with interim deadlines.

Phase 2: Content Generation (4-6 months)

Each functional area prepares their CTD sections:

DepartmentPrimary ResponsibilityKey Deliverables
Regulatory AffairsModules 1 and 2, overall coordinationSummaries, overviews, administrative forms
Quality/CMCModule 3Manufacturing descriptions, specifications, validation
NonclinicalModule 4Toxicology and pharmacology study reports
ClinicalModule 5Clinical study reports, integrated summaries
Medical WritingSupport across modulesFormatting, editing, consistency checks

Technical writing support proves valuable for consistent terminology and formatting across sections.

Phase 3: Review and Quality Control (1-2 months)

Senior scientists review technical content for accuracy. Regulatory affairs staff verify compliance with ICH M4 guidelines structure. Quality control teams check formatting and document numbering.

Phase 4: Assembly and Validation (2-4 weeks)

For eCTD submissions, technical specialists assemble the backbone XML file and validate the package. These tools check for structural errors and broken links.

CTD Format Requirements by Region

While Modules 2-5 remain identical across ICH regions, Module 1 requirements differ significantly.

RegionRegulatory AgencyModule 1 Key RequirementsSubmission Portal
United StatesFDAForms 356h/1571, proposed labelingFDA ESG or Gateway
European UnionEMAApplication forms, QRD-compliant infoEMA CESP Portal
JapanPMDAJapanese-language documentsPMDA eCTD Portal
CanadaHealth CanadaAdministrative forms, Canadian labelingHC eCTD Portal
AustraliaTGAEvaluation fees, Australian documentsTGA Business Services

Each region also has specific technical requirements for eCTD submission. File size limits and validation tool versions vary by agency.

For products that cover multiple development stages, understanding pharma regulatory compliance across these regions helps avoid costly submission errors.

Common CTD Preparation Challenges

From working with pharmaceutical manufacturers, we have observed that certain challenges appear repeatedly during CTD compilation.

Challenge 1: Inconsistent Data Across Studies

Clinical trials conducted over years may use different protocols or analytical methods. Explaining these differences clearly prevents reviewer concerns.

Challenge 2: Manufacturing Changes During Development

Companies often optimize their manufacturing process between early trials and commercial production. Module 3 must clearly describe these changes with comparability data.

Challenge 3: Missing Validation Data

Analytical methods and manufacturing processes all require validation. Companies sometimes discover gaps in validation documentation late in CTD preparation. These gaps can delay submissions by months.

Challenge 4: Cross-Reference Management

CTDs contain thousands of internal cross-references. Module 2 summaries reference detailed reports in Modules 3-5. Accurate tracking systems are essential.

Expert CTD Preparation Support for FDA-Regulated Manufacturers

If your pharmaceutical, biologics, or animal health company needs to prepare a common technical document submission without the risks of incomplete documentation or regulatory delays, GMP Pros provides the regulatory and technical expertise you need.

The team addresses documentation gaps during preparation when fixes take days, not during agency review when the same issues cause months of delay.

Partner with GMP Pros today and prepare regulatory submissions that meet global standards while keeping your timeline on track.

Infographic: CTD vs. eCTD. eCTD is the electronic submission format using an XML file. Person marking checklists on a virtual screen above a laptop.

Frequently Asked Questions (FAQ) Related To Common Technical Documentation

What is the difference between CTD and eCTD?

CTD refers to the content organization defined by ICH M4 guidelines. eCTD is the electronic format for submitting that content using XML backbone files. Most agencies now require eCTD format.

How long does it take to prepare a CTD?

A complete new drug application typically requires 6-12 months to prepare. Complex biologics may need longer. Variations or supplements often take 2-4 months depending on scope.

Which module takes the longest to prepare?

Module 5 typically has the highest page count, but Module 3 often takes the longest calendar time. Module 3 requires input from multiple departments and extensive manufacturing documentation.

Do all countries accept the CTD format?

All ICH member regions (U.S., EU, Japan, Canada, Switzerland) accept and often require CTD format. Many non-ICH countries also accept CTD submissions.

Can I reuse CTD modules across different products?

Module 1 must be created specifically for each product and region. Modules 2-5 are product-specific and cannot be reused directly. However, companies may reuse certain sections with appropriate modifications.

GMP Pros Editorial Team

The GMP Pros Editorial Team comprises seasoned engineers and compliance specialists with extensive experience in regulated pharmaceutical, biologics, food, and animal health manufacturing environments. Our content combines practical engineering expertise with deep regulatory knowledge to deliver actionable insights that help manufacturers optimize capacity, efficiency, and quality.

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